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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
15
total RNA-seq
2
ATAC-seq
Assay category
121
DNA binding
15
Transcription
2
DNA accessibility
Target of assay
105
histone
105
histone modification
62
broad histone mark
43
narrow histone mark
16
transcription factor
6
RNA binding protein
Date released
551
February, 2021
334
November, 2017
303
May, 2021
260
May, 2020
257
August, 2017
207
October, 2019
169
June, 2019
164
July, 2018
91
May, 2019
73
July, 2019
73
November, 2018
72
December, 2017
72
September, 2018
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
May, 2022
18
March, 2020
14
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
197
bed narrowPeak
162
bam
138
bigWig
123
tsv
91
bigBed narrowPeak
64
xls
57
txt
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
138
Homo sapiens
Biosample type
87
tissue
22
cell line
22
in vitro differentiated cells
7
primary cell
Organ
39
blood vessel
39
vasculature
25
brain
17
liver
15
heart
8
embryo
7
epithelium
6
limb
musculature of body
4
kidney
3
artery
2
connective tissue
1
pancreas
Project
138
AMP
Genome assembly (visualization)
137
hg19
122
GRCh38
Lab
122
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bigBed bedMethyl
month_released!
April, 2019
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
138 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 5 more…
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
primary cell
kidney epithelial cell
4
hepatocyte
3
See all biosamples
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