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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
6
ChIP-seq
Assay category
122
Transcription
6
DNA binding
Target of assay
4
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
551
February, 2021
270
November, 2017
257
August, 2017
215
May, 2020
198
October, 2019
164
July, 2018
128
May, 2021
97
May, 2019
85
July, 2019
72
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
23
June, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
September, 2017
4
November, 2020
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
142
bam
128
bigWig
122
tsv
19
bed narrowPeak
6
tagAlign
Organism
128
Homo sapiens
Biosample type
84
in vitro differentiated cells
38
tissue
5
cell line
1
primary cell
Organ
43
pancreas
9
epithelium
3
heart
2
embryo
1
connective tissue
Project
127
AMP
1
T1D
Genome assembly (visualization)
128
GRCh38
128
hg19
Lab
Kyle Gaulton, UCSD
128
AMP-T2D consortium
Audit category:
73
inconsistent ontology term
files.file_type!
bigBed broadPeak
xls
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
128 results
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Clear Filters
total RNA-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
2
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
1
primary cell
embryonic stem cell
1
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