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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
15
total RNA-seq
2
ATAC-seq
Assay category
29
DNA binding
15
Transcription
2
DNA accessibility
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
RNA binding protein
Date released
551
February, 2021
303
May, 2021
260
May, 2020
224
August, 2017
164
July, 2018
137
October, 2019
83
July, 2019
58
September, 2018
49
April, 2018
46
August, 2021
35
May, 2024
31
February, 2018
30
November, 2019
23
November, 2017
22
December, 2017
20
March, 2020
20
May, 2022
8
January, 2018
8
October, 2017
August, 2020
7
November, 2018
5
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
2
October, 2018
1
April, 2019
Available data
123
tsv
105
bed narrowPeak
64
xls
57
txt
49
bam
46
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
46
Homo sapiens
Biosample type
22
in vitro differentiated cells
21
cell line
3
primary cell
Organ
16
liver
8
embryo
3
epithelium
2
connective tissue
Project
46
AMP
Genome assembly (visualization)
45
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
13
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
files.file_type!
bigBed narrowPeak
month_released!
August, 2020
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
cell line
HepG2
13
H1-hESC
8
primary cell
hepatocyte
3
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