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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
5
GRO-seq
5
total RNA-seq
3
ATAC-seq
Assay category
21
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
3
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
35
fastq
34
bigWig
30
bam
21
bed narrowPeak
21
bigBed narrowPeak
5
tsv
Organism
34
Homo sapiens
Biosample type
21
cell line
8
tissue
4
in vitro differentiated cells
1
stem cell
Organ
16
blood
16
bodily fluid
6
spleen
5
liver
1
adipose tissue
1
connective tissue
1
embryo
1
musculature of body
Project
34
AMP
Genome assembly (visualization)
29
hg19
26
GRCh38
5
hg18
Lab
34
AMP-T2D consortium
files.file_type!
ibed
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
GRO-seq
total RNA-seq
ATAC-seq
cell line
GM12878
15
1
HepG2
5
tissue
spleen
6
adipose tissue
1
skeletal muscle tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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