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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
546
February, 2021
277
November, 2017
234
August, 2017
233
May, 2020
214
May, 2021
210
June, 2019
167
October, 2019
164
July, 2018
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
October, 2018
40
May, 2024
31
August, 2021
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
93
fastq
77
bed narrowPeak
17
bigWig
16
tsv
15
bam
tagAlign
10
bed bed3
7
txt
6
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
3
bed bedgraph
Organism
11
Homo sapiens
Biosample type
8
tissue
3
in vitro differentiated cells
Organ
5
pancreas
1
adipose tissue
1
brain
1
connective tissue
1
spleen
Project
11
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
7
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
files.file_type!
tagAlign
month_released!
May, 2019
BIOSAMPLE
ASSAY
11 results
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Clear Filters
ATAC-seq
tissue
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
spleen
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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