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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
124
ChIP-seq
45
ATAC-seq
Assay category
188
Transcription
124
DNA binding
45
DNA accessibility
Target of assay
119
histone
119
histone modification
61
narrow histone mark
58
broad histone mark
5
RNA binding protein
5
transcription factor
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
403
bam
357
bigWig
189
tsv
124
bed narrowPeak
97
bigBed narrowPeak
50
tagAlign
Organism
357
Homo sapiens
Biosample type
263
tissue
94
primary cell
Organ
170
liver
39
blood vessel
39
vasculature
25
brain
15
heart
6
limb
6
musculature of body
4
epithelium
4
kidney
3
artery
1
pancreas
Project
312
AMP
45
T1D
Genome assembly (visualization)
357
hg19
303
GRCh38
Lab
312
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
files.file_type!
vcf
lab.title!
Anna Gloyn, Oxford
BIOSAMPLE
ASSAY
357 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
liver
143
27
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
+ See 7 more…
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
+ See 21 more…
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