Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
3
Hi-C
Assay category
10
DNA accessibility
3
3D chromatin structure
Date released
7
August, 2020
3
October, 2022
3
September, 2020
Available data
169
fastq
153
zippedFastqFolder
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
0
xls
Organism
13
Homo sapiens
Biosample type
13
primary cell
Organ
13
epithelium
13
pancreas
Project
13
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
2858
AMP-T2D consortium
220
Kyle Gaulton, UCSD
65
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
16
Bing Ren, UCSD
13
Klaus Kaestner, Upenn
5
Struan F.A. Grant, CHOP
1
ITG
1
Stephen Parker, UMich
Audit category:
3
audit script error
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
7
1
pancreatic beta cell
3
1
pancreatic acinar cell
1
Download