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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
12
ChIP-seq
2
Hi-C
1
FAIRE-seq
Assay category
21
DNA accessibility
12
DNA binding
2
3D chromatin structure
Target of assay
12
histone
12
histone modification
7
broad histone mark
5
narrow histone mark
Date released
18
June, 2019
16
October, 2019
1
March, 2020
Available data
38
bam
33
bigWig
31
bed narrowPeak
31
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
20
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
35
Homo sapiens
Biosample type
18
tissue
17
primary cell
Organ
624
liver
568
connective tissue
477
pancreas
425
adipose tissue
274
epithelium
227
heart
222
brain
158
vasculature
153
blood vessel
132
kidney
91
limb
85
artery
70
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
17
vein
16
spleen
6
eye
1
pericardium
1
pituitary gland
Project
35
AMP
Genome assembly (visualization)
35
hg19
30
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
July, 2018
BIOSAMPLE
ASSAY
35 results
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DNase-seq
ChIP-seq
Hi-C
FAIRE-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
primary cell
endothelial cell of umbilical vein
2
12
2
1
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