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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
total RNA-seq
14
small RNA-seq
8
WGBS
5
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
54
Transcription
8
DNA methylation
6
DNA accessibility
1
3D chromatin structure
Date released
554
February, 2021
319
August, 2017
304
May, 2021
283
May, 2020
268
November, 2017
180
June, 2019
164
July, 2018
133
October, 2019
78
November, 2018
72
December, 2017
72
May, 2019
72
September, 2018
69
July, 2019
65
April, 2019
55
August, 2021
49
April, 2018
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
8
January, 2018
7
August, 2020
7
October, 2017
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
69
bam
69
bigWig
54
tsv
21
bed bedMethyl
21
bigBed bedMethyl
6
bed narrowPeak
1
bed bed3+
1
bigBed narrowPeak
1
hdf5
0
tagAlign
Organism
69
Homo sapiens
Biosample type
53
tissue
16
primary cell
Organ
21
heart
17
connective tissue
brain
12
adipose tissue
10
blood vessel
10
vasculature
8
liver
7
epithelium
7
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
69
AMP
Genome assembly (visualization)
67
GRCh38
61
hg19
Lab
69
AMP-T2D consortium
month_released!
February, 2020
organ_slims!
brain
BIOSAMPLE
ASSAY
69 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
FAIRE-seq
Hi-C
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 15 more…
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
+ See 9 more…
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