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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
7
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
48
DNA binding
38
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
May, 2019
3
February, 2020
1
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
94
Homo sapiens
Biosample type
94
tissue
Organ
634
liver
626
pancreas
574
connective tissue
428
adipose tissue
322
heart
310
epithelium
236
brain
165
vasculature
160
blood vessel
143
kidney
94
limb
89
artery
71
musculature of body
58
bone element
55
blood
55
bodily fluid
32
nerve
29
embryo
18
ureter
17
spleen
15
vein
11
eye
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
thymus
1
urinary bladder
Project
94
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
94
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
thymus
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
5
1
tibial artery
18
2
1
1
muscle of leg
6
13
1
muscle of arm
17
forelimb muscle
1
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