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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
15
total RNA-seq
3
ATAC-seq
Assay category
16
DNA binding
15
Transcription
3
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
October, 2018
40
May, 2024
33
August, 2021
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
115
fastq
81
bed narrowPeak
39
bam
34
bigWig
31
tsv
10
bed bed3
7
txt
4
bed bed3+
3
bed bedgraph
Organism
34
Homo sapiens
Biosample type
34
in vitro differentiated cells
Organ
10
embryo
Project
34
AMP
Genome assembly (visualization)
34
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
Audit category:
2
inconsistent control read length
lab.title!
Bing Ren, UCSD
month_released!
August, 2020
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
6
4
embryonic stem cell
2
2
1
definitive endodermal cell
2
2
endocrine cell
2
2
posterior foregut
2
2
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