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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
8
ATAC-seq
2
total RNA-seq
Assay category
51
DNA binding
8
DNA accessibility
2
Transcription
Target of assay
36
histone
36
histone modification
24
broad histone mark
15
transcription factor
12
narrow histone mark
11
RNA binding protein
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
91
bam
77
fastq
61
bigWig
57
bed narrowPeak
51
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
2
tsv
Organism
61
Homo sapiens
Biosample type
59
tissue
2
primary cell
Organ
47
pancreas
7
brain
6
adipose tissue
6
connective tissue
2
epithelium
1
spleen
Project
61
AMP
Genome assembly (visualization)
61
GRCh38
60
hg19
Lab
60
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
missing controlled_by
Audit category:
1
inconsistent control read length
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
body of pancreas
25
4
endocrine pancreas
14
brain
6
omental fat pad
3
1
subcutaneous adipose tissue
2
+ See 4 more…
primary cell
pancreatic acinar cell
2
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