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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
69
histone
69
histone modification
37
narrow histone mark
32
broad histone mark
9
transcription factor
8
RNA binding protein
2
control
1
chromatin remodeller
Date released
September, 2018
18
October, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
72
bam
69
bigWig
67
bed narrowPeak
30
fastq
29
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
69
Homo sapiens
Biosample type
42
primary cell
15
in vitro differentiated cells
12
cell line
Organ
166
brain
110
pancreas
97
heart
83
liver
69
epithelium
68
vasculature
67
blood vessel
48
limb
35
connective tissue
30
kidney
27
musculature of body
24
nerve
20
artery
12
vein
11
embryo
6
spleen
2
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
67
AMP
2
T1D
Genome assembly (visualization)
69
hg19
67
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
5
inconsistent control read length
month_released!
December, 2019
September, 2018
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
12
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
pancreatic beta cell
7
hepatocyte
3
+ See 4 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
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