Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
3
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
3
DNA binding
Target of assay
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
8
August, 2021
4
February, 2018
3
December, 2017
2
May, 2021
1
January, 2018
Available data
24
bam
18
bigWig
15
fastq
14
tsv
3
bed narrowPeak
1
bed bed3+
Organism
18
Homo sapiens
Biosample type
10
in vitro differentiated cells
8
cell line
Organ
535
connective tissue
535
liver
481
pancreas
423
adipose tissue
211
epithelium
127
heart
101
kidney
87
vasculature
83
blood vessel
65
artery
58
bone element
56
brain
43
limb
41
musculature of body
40
blood
40
bodily fluid
18
embryo
18
ureter
10
spleen
7
nerve
5
eye
3
vein
1
pericardium
Project
18
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
1
hg18
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
January, 2019
January, 2021
target.investigated_as!
histone
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
3
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
Download