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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
52
total RNA-seq
9
DNase-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
76
DNA binding
52
Transcription
11
DNA accessibility
Target of assay
67
histone
67
histone modification
43
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
1
control
Date released
56
February, 2021
39
May, 2019
36
October, 2019
July, 2019
5
June, 2019
3
November, 2017
March, 2020
Available data
170
bam
139
bigWig
127
bed narrowPeak
79
bigBed narrowPeak
61
tsv
13
bed broadPeak
13
bigBed broadPeak
9
bed bed3+
6
tagAlign
3
fastq
1
hic
1
tar
Organism
139
Homo sapiens
Biosample type
63
tissue
56
cell line
20
primary cell
Organ
613
liver
609
pancreas
553
connective tissue
413
adipose tissue
289
epithelium
206
brain
201
heart
144
vasculature
139
blood vessel
124
kidney
90
limb
82
artery
61
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pituitary gland
Project
139
AMP
Genome assembly (visualization)
138
hg19
135
GRCh38
Lab
139
AMP-T2D consortium
month_released!
July, 2019
March, 2020
BIOSAMPLE
ASSAY
139 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial artery
18
2
1
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
cell line
smooth muscle cell of the coronary artery
4
52
primary cell
endothelial cell of umbilical vein
12
2
1
brain microvascular endothelial cell
3
1
kidney capillary endothelial cell
1
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