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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
399
ChIP-seq
Assay category
399
DNA binding
Target of assay
245
transcription factor
135
histone
135
histone modification
82
broad histone mark
66
recombinant protein
53
narrow histone mark
38
RNA binding protein
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
471
bam
399
bigWig
378
bed narrowPeak
376
bigBed narrowPeak
324
fastq
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
399
Homo sapiens
Biosample type
268
cell line
122
tissue
9
primary cell
Organ
268
liver
66
brain
47
heart
18
kidney
6
epithelium
6
vasculature
3
blood vessel
Project
399
AMP
Genome assembly (visualization)
346
hg19
343
GRCh38
Lab
399
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
March, 2020
BIOSAMPLE
ASSAY
399 results
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Clear Filters
ChIP-seq
cell line
HepG2
268
tissue
heart left ventricle
29
kidney
18
layer of hippocampus
16
caudate nucleus
12
heart right ventricle
11
+ See 5 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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