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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
7
ATAC-seq
5
total RNA-seq
Assay category
118
DNA binding
7
DNA accessibility
5
Transcription
Target of assay
99
histone
99
histone modification
62
broad histone mark
37
narrow histone mark
19
transcription factor
11
RNA binding protein
6
chromatin remodeller
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
150
bam
130
bigWig
118
bed narrowPeak
118
bigBed narrowPeak
37
fastq
5
tsv
Organism
130
Homo sapiens
Biosample type
99
tissue
20
cell line
11
primary cell
Organ
39
blood vessel
39
vasculature
25
brain
15
blood
15
bodily fluid
15
heart
11
epithelium
8
pancreas
6
limb
6
musculature of body
6
spleen
5
liver
4
kidney
3
artery
Project
123
AMP
7
HPAP
Genome assembly (visualization)
129
GRCh38
123
hg19
Lab
123
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
130 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 7 more…
cell line
GM12878
15
HepG2
5
primary cell
pancreatic alpha cell
5
kidney epithelial cell
4
pancreatic beta cell
2
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