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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
total RNA-seq
11
ChIP-seq
7
ATAC-seq
1
DNase-seq
Assay category
24
Transcription
11
DNA binding
8
DNA accessibility
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
74
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
27
December, 2018
20
January, 2019
20
March, 2020
20
May, 2022
13
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
65
bam
43
bigWig
39
bed narrowPeak
24
tsv
7
fastq
2
bedpe bed3+
2
hic
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
19
tissue
12
cell line
12
primary cell
Organ
38
pancreas
19
epithelium
5
connective tissue
Project
36
AMP
7
HPAP
Genome assembly (visualization)
43
GRCh38
36
hg19
Lab
36
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
12
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
43 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
19
cell line
EndoC_BH1
1
11
primary cell
osteoblast
4
1
pancreatic alpha cell
5
pancreatic beta cell
2
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