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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
30
total RNA-seq
2
ATAC-seq
Assay category
46
DNA binding
30
Transcription
2
DNA accessibility
Target of assay
35
histone
35
histone modification
19
narrow histone mark
16
broad histone mark
11
transcription factor
1
RNA binding protein
Date released
495
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
208
June, 2019
186
October, 2019
164
July, 2018
94
May, 2019
82
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
136
tsv
122
bed narrowPeak
88
bam
78
bigWig
64
xls
57
txt
39
fastq
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
78
Homo sapiens
Biosample type
53
in vitro differentiated cells
22
cell line
3
primary cell
Organ
18
embryo
17
liver
3
epithelium
2
connective tissue
Project
78
AMP
Genome assembly (visualization)
77
hg19
62
GRCh38
Lab
62
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent control read length
month_released!
April, 2018
organ_slims!
artery
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
neural progenitor cell
13
7
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
+ See 5 more…
cell line
HepG2
14
H1-hESC
8
primary cell
hepatocyte
3
See all biosamples
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