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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
72
ChIP-seq
48
single cell RNA-seq
1
DNase-seq
Assay category
168
Transcription
72
DNA binding
1
DNA accessibility
Target of assay
67
histone
67
histone modification
43
broad histone mark
24
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
551
February, 2021
303
May, 2021
272
August, 2017
268
November, 2017
260
May, 2020
180
June, 2019
164
July, 2018
131
October, 2019
78
November, 2018
72
December, 2017
72
May, 2019
72
September, 2018
69
July, 2019
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
8
January, 2018
7
August, 2020
7
October, 2017
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
262
bam
241
bigWig
168
tsv
74
bed narrowPeak
73
bigBed narrowPeak
50
fastq
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
241
Homo sapiens
Biosample type
184
tissue
57
primary cell
Organ
154
pancreas
39
blood vessel
39
vasculature
37
epithelium
brain
15
heart
7
connective tissue
6
limb
6
musculature of body
4
kidney
3
artery
Project
241
AMP
Genome assembly (visualization)
241
hg19
240
GRCh38
Lab
241
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
241 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
DNase-seq
tissue
islet of Langerhans
116
ascending aorta
13
thoracic aorta
12
aorta
11
germinal matrix
10
+ See 5 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
osteoblast
4
1
pancreatic acinar cell
5
kidney epithelial cell
4
+ See 12 more…
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