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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
2
Hi-C
Assay category
60
Transcription
8
DNA accessibility
8
DNA methylation
2
3D chromatin structure
Target of assay
3
control
Date released
525
February, 2021
328
November, 2017
294
May, 2021
260
May, 2020
255
August, 2017
192
June, 2019
182
October, 2019
131
July, 2018
93
May, 2019
80
November, 2018
78
July, 2019
65
April, 2019
56
December, 2017
October, 2018
44
August, 2021
40
May, 2024
31
February, 2018
30
December, 2018
26
January, 2019
20
May, 2022
19
November, 2019
16
April, 2018
15
March, 2020
14
October, 2017
11
September, 2018
8
January, 2018
5
November, 2020
February, 2023
2
June, 2018
Available data
78
bigWig
77
bam
60
tsv
17
bed bedMethyl
17
bigBed bedMethyl
7
bed narrowPeak
2
bed bed3+
2
bigBed narrowPeak
2
hdf5
Organism
78
Homo sapiens
Biosample type
63
tissue
15
primary cell
Organ
21
heart
17
connective tissue
16
brain
12
adipose tissue
10
blood vessel
10
vasculature
8
liver
epithelium
7
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
78
AMP
Genome assembly (visualization)
74
GRCh38
69
hg19
Lab
78
AMP-T2D consortium
month_released!
February, 2023
October, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
78 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
Hi-C
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 7 more…
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