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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
17
DNase-seq
3
total RNA-seq
1
FAIRE-seq
Assay category
22
DNA binding
18
DNA accessibility
3
Transcription
Target of assay
20
histone
20
histone modification
10
broad histone mark
10
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
61
September, 2018
33
April, 2018
33
July, 2018
26
February, 2021
25
October, 2019
18
June, 2019
17
August, 2017
16
December, 2017
12
November, 2019
9
May, 2021
7
August, 2020
7
July, 2019
6
November, 2017
5
December, 2019
5
March, 2020
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
September, 2020
2
October, 2018
1
June, 2018
Available data
52
bam
43
bigWig
39
bed narrowPeak
32
bigBed narrowPeak
18
bed broadPeak
18
bigBed broadPeak
16
bed bed3+
3
tsv
1
hic
1
tar
Organism
43
Homo sapiens
Biosample type
41
primary cell
2
cell line
Organ
106
brain
102
kidney
84
limb
43
epithelium
43
vasculature
41
blood vessel
41
musculature of body
40
heart
31
nerve
23
artery
18
connective tissue
18
ureter
15
vein
12
pancreas
8
liver
6
eye
2
adipose tissue
1
pituitary gland
Project
43
AMP
Genome assembly (visualization)
40
GRCh38
37
hg19
Lab
43
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
1
epithelial cell of proximal tubule
8
1
kidney tubule cell
2
1
retinal pigment epithelial cell
2
1
glomerular visceral epithelial cell
2
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cell line
glomerular visceral epithelial cell
1
1
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