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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
67
ChIP-seq
45
ATAC-seq
Assay category
190
Transcription
67
DNA binding
45
DNA accessibility
Target of assay
57
histone
57
histone modification
38
narrow histone mark
19
broad histone mark
10
transcription factor
6
RNA binding protein
Date released
334
November, 2017
302
May, 2021
260
May, 2020
207
August, 2017
204
October, 2019
195
June, 2019
162
July, 2018
February, 2021
97
May, 2019
79
November, 2018
72
December, 2017
72
September, 2018
68
July, 2019
65
April, 2019
47
April, 2018
45
August, 2021
42
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
13
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
336
bam
302
bigWig
191
tsv
67
bed narrowPeak
50
tagAlign
40
bigBed narrowPeak
37
fastq
Organism
302
Homo sapiens
Biosample type
210
tissue
92
primary cell
Organ
170
liver
42
pancreas
5
adipose tissue
connective tissue
2
epithelium
Project
257
AMP
45
T1D
Genome assembly (visualization)
302
hg19
249
GRCh38
Lab
257
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
February, 2021
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
302 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
liver
143
27
body of pancreas
25
endocrine pancreas
14
pancreas
1
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
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