Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
20
ATAC-seq
3
DNase-seq
1
WGBS
Assay category
48
DNA binding
23
DNA accessibility
1
DNA methylation
Target of assay
48
transcription factor
19
RNA binding protein
15
recombinant protein
5
chromatin remodeller
Date released
268
November, 2017
170
May, 2020
52
November, 2018
50
December, 2017
20
May, 2022
18
August, 2017
17
August, 2021
8
July, 2019
6
October, 2019
5
December, 2019
5
January, 2019
2
June, 2019
1
March, 2020
Available data
72
bigWig
71
bed narrowPeak
53
bam
53
fastq
51
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
72
Homo sapiens
Biosample type
45
cell line
27
tissue
Organ
72
liver
12
blood
12
bodily fluid
7
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
72
AMP
Genome assembly (visualization)
69
hg19
52
GRCh38
Lab
52
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
72 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
WGBS
cell line
HepG2
44
1
tissue
liver
4
20
2
right lobe of liver
1
Download