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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
Assay category
35
DNA binding
Target of assay
240
transcription factor
75
histone
75
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
30
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
35
November, 2017
21
November, 2018
11
October, 2018
8
August, 2017
6
January, 2019
5
May, 2019
5
May, 2024
4
December, 2017
4
June, 2019
3
April, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
37
bam
37
fastq
35
bed narrowPeak
35
bigBed narrowPeak
35
bigWig
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
35
Homo sapiens
Biosample type
32
cell line
3
primary cell
Organ
32
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
35
AMP
Genome assembly (visualization)
34
hg19
31
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
month_released!
March, 2020
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
cell line
HepG2
32
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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