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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
6
total RNA-seq
1
DNase-seq
Assay category
15
DNA binding
6
Transcription
1
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
5
narrow histone mark
3
broad histone mark
Date released
80
June, 2019
22
October, 2019
18
April, 2019
7
July, 2019
4
May, 2019
Available data
28
bam
22
bigWig
16
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
22
Homo sapiens
Biosample type
12
cell line
8
primary cell
2
tissue
Organ
76
brain
52
limb
36
blood vessel
36
vasculature
31
nerve
25
epithelium
22
kidney
21
artery
15
vein
8
pancreas
7
heart
6
liver
3
connective tissue
1
adipose tissue
1
pituitary gland
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
22
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
month_released!
September, 2020
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
3
1
RCC 7860 HIF2a over-expression
2
1
RCC 7860 vector
2
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
6
kidney glomerular epithelial cell
1
kidney tubule cell
1
tissue
kidney
2
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