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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 176ChIP-seq
  • 16total RNA-seq
  • 8DNase-seq
  • 5ATAC-seq
  • 1FAIRE-seq
  • 1Hi-C
Assay category
  • 176DNA binding
  • 16Transcription
  • 14DNA accessibility
  • 13D chromatin structure
Target of assay
  • 169histone
  • 169histone modification
  • 117narrow histone mark
  • 52broad histone mark
  • 7recombinant protein
  • 7transcription factor
Date released
  • 551February, 2021
  • 334November, 2017
  • 303May, 2021
  • 272August, 2017
  • 260May, 2020
  • 210June, 2019
  • 207October, 2019
  • 164July, 2018
  • 97May, 2019
  • 85July, 2019
  • 80November, 2018
  • 72December, 2017
  • 72September, 2018
  • 65April, 2019
  • 49April, 2018
  • 47August, 2021
  • 47October, 2018
  • 40May, 2024
  • 31February, 2018
  • 31November, 2019
  • 30December, 2018
  • 26January, 2019
  • 20March, 2020
  • 20May, 2022
  • 14October, 2017
  • 8January, 2018
  • 7August, 2020
  • 5December, 2019
  • 5November, 2020
  • 5September, 2017
  • 3August, 2018
  • 3February, 2023
  • 3June, 2018
  • 3September, 2020
Available data
  • 250bam
  • 207bigWig
  • 189bed narrowPeak
  • 70bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 207Homo sapiens
Biosample type
  • 160tissue
  • 23primary cell
  • 20cell line
  • 4in vitro differentiated cells
Organ
  • 76brain
  • 52limb
  • 36blood vessel
  • 36vasculature
  • 31nerve
  • 25epithelium
  • 22kidney
  • 21artery
  • 15vein
  • 8pancreas
  • 7heart
  • 6liver
  • 3connective tissue
  • 1adipose tissue
  • 1pituitary gland
Project
  • 207AMP
Genome assembly (visualization)
  • 207hg19
  • 201GRCh38
Lab
  • 207AMP-T2D consortium
Audit category:
  • 14inconsistent ontology term
Audit category:
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

207 results

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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve24421
tibial artery1821
heart52
brain51
liver51
primary cell
endothelial cell of umbilical vein1221
epithelial cell of proximal tubule6
kidney glomerular epithelial cell1
kidney tubule cell1
cell line
Panc1611
RCC 7860 HIF1a re-expression31
RCC 7860 HIF2a over-expression21
RCC 7860 vector21
glomerular visceral epithelial cell11
in vitro differentiated cells
adipocyte2
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
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