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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 114ChIP-seq
  • 69total RNA-seq
  • 30DNase-seq
  • 6WGBS
  • 4ATAC-seq
  • 1small RNA-seq
Assay category
  • 114DNA binding
  • 70Transcription
  • 34DNA accessibility
  • 6DNA methylation
Target of assay
  • 97histone
  • 97histone modification
  • 57broad histone mark
  • 40narrow histone mark
  • 17transcription factor
  • 11RNA binding protein
Date released
  • 56February, 2021
  • 47April, 2019
  • 40May, 2024
  • 33June, 2019
  • 21July, 2019
  • 15May, 2019
  • 7October, 2019
  • 3May, 2021
  • 2March, 2020
Available data
  • 224bigWig
  • 211bam
  • 191bed narrowPeak
  • 168tsv
  • 94bigBed narrowPeak
  • 30bed bed3+
  • 30bed broadPeak
  • 30bigBed broadPeak
  • 8bed bedMethyl
  • 8bigBed bedMethyl
  • 6tagAlign
  • 3bedpe bed3+
  • 3hic
Organism
  • 224Homo sapiens
Biosample type
  • 157tissue
  • 56cell line
  • 10primary cell
  • 1in vitro differentiated cells
Organ
  • 623pancreas
  • 622liver
  • 570connective tissue
  • 425adipose tissue
  • 301epithelium
  • 224heart
  • 222brain
  • 155vasculature
  • 150blood vessel
  • 131kidney
  • 91limb
  • 85artery
  • 68musculature of body
  • 58bone element
  • 55blood
  • 55bodily fluid
  • 31nerve
  • 29embryo
  • 18ureter
  • 16spleen
  • 15vein
  • 6eye
  • 1pericardium
  • 1pituitary gland
Project
  • 224AMP
Genome assembly (visualization)
  • 223GRCh38
  • 175hg19
Lab
  • 184AMP-T2D consortium
  • 40Patrick T. Ellinor, Broad
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

224 results

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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
WGBS
ATAC-seq
small RNA-seq
tissue
left cardiac atrium401
heart left ventricle293322
heart1241811
heart right ventricle11112
right atrium auricular region7221
cell line
smooth muscle cell of the coronary artery452
primary cell
cardiac fibroblast33
cardiac atrium fibroblast1
cardiac ventricle fibroblast1
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
in vitro differentiated cells
cardiac fibroblast1
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