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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 79DNase-seq
  • 39ChIP-seq
  • 11total RNA-seq
  • 1FAIRE-seq
  • 1small RNA-seq
Assay category
  • 80DNA accessibility
  • 39DNA binding
  • 12Transcription
Target of assay
  • 30histone
  • 30histone modification
  • 15broad histone mark
  • 15narrow histone mark
  • 9transcription factor
  • 7recombinant protein
  • 2RNA binding protein
Date released
  • 80June, 2019
  • 22October, 2019
  • 18April, 2019
  • 7July, 2019
  • 4May, 2019
Available data
  • 183bed narrowPeak
  • 144bam
  • 131bigWig
  • 104bigBed narrowPeak
  • 78bed bed3+
  • 78bed broadPeak
  • 78bigBed broadPeak
  • 64xls
  • 62txt
  • 24tsv
  • 5csv
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 1hic
Organism
  • 131Homo sapiens
Biosample type
  • 91tissue
  • 28primary cell
  • 12cell line
Organ
  • 623pancreas
  • 622liver
  • 570connective tissue
  • 425adipose tissue
  • 301epithelium
  • 224heart
  • 222brain
  • 155vasculature
  • 150blood vessel
  • 131kidney
  • 91limb
  • 85artery
  • 68musculature of body
  • 58bone element
  • 55blood
  • 55bodily fluid
  • 31nerve
  • 29embryo
  • 18ureter
  • 16spleen
  • 15vein
  • 6eye
  • 1pericardium
  • 1pituitary gland
Project
  • 131AMP
Genome assembly (visualization)
  • 130GRCh38
  • 124hg19
Lab
  • 131AMP-T2D consortium
Audit category:
  • 15inconsistent ontology term
BIOSAMPLE
ASSAY

131 results

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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
FAIRE-seq
small RNA-seq
tissue
kidney13201
renal cortex interstitium11
renal pelvis10
right kidney10
left kidney9
primary cell
epithelial cell of proximal tubule181
kidney epithelial cell141
kidney tubule cell21
glomerular endothelial cell11
glomerular visceral epithelial cell2
cell line
RCC 7860 HIF1a re-expression31
RCC 7860 HIF2a over-expression21
RCC 7860 vector21
glomerular visceral epithelial cell11
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