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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 106ChIP-seq
Assay category
  • 106DNA binding
Target of assay
  • 869histone modification
  • 868histone
  • 496transcription factor
  • 440narrow histone mark
  • 427broad histone mark
  • 106RNA binding protein
  • 88recombinant protein
  • 36chromatin remodeller
  • 23control
  • 5other context
  • 5other post-translational modification
Date released
  • 35November, 2017
  • 21November, 2018
  • 11October, 2018
  • 8August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2024
  • 4December, 2017
  • 4June, 2019
  • 3April, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 106bigWig
  • 105bed narrowPeak
  • 103bam
  • 93bigBed narrowPeak
  • 89fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 106Homo sapiens
Biosample type
  • 63cell line
  • 27tissue
  • 10primary cell
  • 6in vitro differentiated cells
Organ
  • 56liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 9pancreas
  • 8epithelium
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 2kidney
  • 1artery
  • 1eye
Project
  • 106AMP
Genome assembly (visualization)
  • 100GRCh38
  • 100hg19
Lab
  • 100AMP-T2D consortium
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 3missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
BIOSAMPLE
ASSAY

106 results

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Clear Filters
ChIP-seq
cell line
HepG252
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
adipocyte4
hepatocyte2
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