Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 20ChIP-seq
  • 3single cell RNA-seq
Assay category
  • 20DNA binding
  • 3Transcription
Target of assay
  • 869histone modification
  • 868histone
  • 496transcription factor
  • 440narrow histone mark
  • 427broad histone mark
  • 106RNA binding protein
  • 88recombinant protein
  • 36chromatin remodeller
  • 23control
  • 5other context
  • 5other post-translational modification
Date released
  • 16November, 2017
  • 3July, 2019
  • 3May, 2021
  • 1August, 2017
Available data
  • 306bam
  • 168fastq
  • 68tagAlign
  • 23bigWig
  • 9bed bed3+
  • 3tsv
Organism
  • 23Homo sapiens
Biosample type
  • 13cell line
  • 10primary cell
Organ
  • 13liver
  • 6brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 23AMP
Genome assembly (visualization)
  • 23hg19
  • 3GRCh38
Lab
  • 20AMP-T2D consortium
  • 3Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY

23 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG213
primary cell
CD8-positive, alpha-beta T cell3
cerebellar granule cell2
Purkinje cell1
astrocyte of the cerebellum1
brain microvascular endothelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego