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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
1
ChIP-seq
Assay category
3
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
3
October, 2022
1
October, 2019
Available data
3146
bigWig
3086
bam
1817
bed narrowPeak
1597
tsv
1190
fastq
1042
bigBed narrowPeak
330
tagAlign
322
bed broadPeak
285
bigBed broadPeak
264
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Organ
3
epithelium
3
pancreas
1
brain
Project
3
HPAP
1
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
files.file_type!
bed bedMethyl
target.investigated_as!
control
BIOSAMPLE
ASSAY
4 results
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Hi-C
ChIP-seq
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
medial globus pallidus
1
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