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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
4
Hi-C
Assay category
8
Transcription
4
3D chromatin structure
Date released
6
February, 2021
4
July, 2019
1
November, 2018
1
September, 2018
Available data
2703
bam
2546
bigWig
1603
bed narrowPeak
1182
tsv
951
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
12
Homo sapiens
Biosample type
6
primary cell
6
tissue
Organ
5
kidney
3
brain
2
blood vessel
2
epithelium
2
liver
2
vasculature
1
connective tissue
pancreas
Project
12
AMP
Genome assembly (visualization)
4
hg19
Lab
12
AMP-T2D consortium
Audit category:
5
audit script error
month_released!
April, 2020
organ_slims!
adrenal gland
pancreas
BIOSAMPLE
ASSAY
12 results
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single cell RNA-seq
Hi-C
primary cell
pancreatic cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
tissue
kidney
5
liver
1
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