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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
2
pCHi-C
Assay category
8
Transcription
Date released
6
February, 2021
2
March, 2020
1
November, 2018
1
September, 2018
Available data
3333
bam
3138
bigWig
1780
bed narrowPeak
1580
tsv
1358
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
vcf
Organism
10
Homo sapiens
Biosample type
6
tissue
2
in vitro differentiated cells
2
primary cell
Organ
5
kidney
1
liver
Project
10
AMP
Genome assembly (visualization)
2
hg19
Lab
10
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
files.file_type!
vcf
month_released!
November, 2019
BIOSAMPLE
ASSAY
10 results
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single cell RNA-seq
pCHi-C
tissue
kidney
5
liver
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
pancreatic cell
2
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