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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
single cell RNA-seq
21
snATAC-seq
Assay category
60
Transcription
21
DNA accessibility
Date released
54
May, 2022
19
September, 2020
6
February, 2021
1
November, 2018
1
September, 2018
Available data
3075
bam
2868
bigWig
1666
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
81
Homo sapiens
Biosample type
75
primary cell
6
tissue
Organ
epithelium
80
pancreas
5
kidney
1
liver
Project
73
HPAP
8
AMP
Lab
73
Klaus Kaestner, Upenn
8
AMP-T2D consortium
Audit category:
5
audit script error
files.file_type!
tagAlign
organ_slims!
epithelium
BIOSAMPLE
ASSAY
81 results
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single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic cell
2
tissue
kidney
5
liver
1
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