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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
3
WGBS
2
ATAC-seq
1
pCHi-C
Assay category
33
DNA binding
3
DNA methylation
2
DNA accessibility
Target of assay
19
control
13
transcription factor
5
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
23
October, 2018
14
August, 2017
1
August, 2018
1
October, 2017
Available data
442
bam
424
bigWig
401
tsv
44
fastq
13
bed narrowPeak
9
bigBed narrowPeak
8
tagAlign
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
39
Homo sapiens
Biosample type
38
tissue
1
in vitro differentiated cells
Organ
459
liver
448
pancreas
257
epithelium
89
connective tissue
60
blood
60
bodily fluid
39
adipose tissue
24
embryo
23
spleen
19
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
39
AMP
Genome assembly (visualization)
18
GRCh38
16
hg19
Lab
39
AMP-T2D consortium
Audit category:
8
missing controlled_by
files.file_type!
bed bed3+
month_released!
October, 2019
organ_slims!
ureter
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
subcutaneous adipose tissue
12
1
omental fat pad
11
1
white adipose tissue
8
adipose tissue
2
3
in vitro differentiated cells
white fat cell
1
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