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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
15
total RNA-seq
Assay category
118
DNA binding
15
Transcription
Target of assay
47
histone
47
histone modification
42
transcription factor
29
control
24
narrow histone mark
23
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
287
August, 2017
258
November, 2017
94
December, 2017
76
February, 2023
73
September, 2018
72
November, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
133
bam
133
fastq
103
bigWig
88
bed narrowPeak
50
bigBed narrowPeak
15
bed bed3+
15
tsv
Organism
133
Homo sapiens
Biosample type
82
in vitro differentiated cells
48
tissue
3
stem cell
Organ
63
liver
26
embryo
19
epithelium
Project
133
AMP
Genome assembly (visualization)
108
GRCh38
108
hg19
Lab
133
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
13
inconsistent control read length
files.file_type!
bed bedgraph
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
133 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
18
4
hepatocyte
15
definitive endodermal cell
8
2
primitive gut cell
8
2
Posterior foregut
5
+ See 5 more…
tissue
liver
38
right lobe of liver
10
stem cell
hESC
3
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