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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
3
WGBS
2
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
37
DNA binding
3
DNA accessibility
3
DNA methylation
Target of assay
19
control
17
transcription factor
5
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
23
October, 2018
18
August, 2017
1
August, 2018
1
November, 2018
1
October, 2017
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
44
Homo sapiens
Biosample type
43
tissue
1
in vitro differentiated cells
Organ
471
pancreas
465
liver
257
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
44
AMP
Genome assembly (visualization)
23
GRCh38
21
hg19
Lab
44
AMP-T2D consortium
Audit category:
12
missing controlled_by
files.file_type!
bed bedgraph
organ_slims!
limb
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
omental fat pad
11
1
1
subcutaneous adipose tissue
12
1
white adipose tissue
12
adipose tissue
2
3
in vitro differentiated cells
white fat cell
1
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