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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
18
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
9
November, 2018
7
December, 2018
5
January, 2019
1
October, 2017
Available data
22
bam
22
fastq
14
bigWig
12
bed narrowPeak
11
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
446
liver
423
pancreas
229
epithelium
88
connective tissue
59
blood
59
bodily fluid
43
adipose tissue
22
spleen
19
embryo
17
brain
4
vasculature
2
blood vessel
2
musculature of body
Project
22
AMP
Genome assembly (visualization)
14
GRCh38
12
hg19
Lab
22
AMP-T2D consortium
files.file_type!
hdf5
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
18
2
1
1
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