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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
32
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
0
October, 2019
Available data
322
bam
279
bigWig
235
bed narrowPeak
84
bigBed narrowPeak
73
fastq
49
tagAlign
42
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
csv
1
hdf5
1
tagAlign bed3+
1
tar
Organism
73
Homo sapiens
Biosample type
73
primary cell
Organ
72
pancreas
61
epithelium
Project
73
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
Audit category:
32
missing controlled_by
files.file_type!
ibed
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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