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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
tsv
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
460
liver
271
pancreas
157
epithelium
98
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
24
spleen
23
embryo
21
brain
6
vasculature
3
blood vessel
2
musculature of body
0
skin of body
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
24
AMP-T2D consortium
files.file_type!
tsv
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
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