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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
365
ChIP-seq
Assay category
365
DNA binding
Target of assay
365
transcription factor
116
control
96
histone
96
histone modification
82
recombinant protein
77
RNA binding protein
54
broad histone mark
42
narrow histone mark
30
chromatin remodeller
5
other context
5
other post-translational modification
Date released
244
November, 2017
64
November, 2018
August, 2017
December, 2017
28
December, 2018
15
October, 2018
14
January, 2019
Available data
407
bigWig
403
bed narrowPeak
396
bam
370
bigBed narrowPeak
365
fastq
47
bed broadPeak
47
bigBed broadPeak
9
tagAlign
3
tar
Organism
365
Homo sapiens
Biosample type
337
cell line
25
tissue
3
primary cell
Organ
290
liver
51
blood
51
bodily fluid
10
pancreas
6
spleen
5
adipose tissue
5
connective tissue
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
365
AMP
Genome assembly (visualization)
356
hg19
324
GRCh38
Lab
365
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
files.file_type!
txt
month_released!
August, 2017
December, 2017
BIOSAMPLE
ASSAY
365 results
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ChIP-seq
cell line
HepG2
286
GM12878
51
tissue
body of pancreas
9
spleen
6
liver
4
omental fat pad
3
subcutaneous adipose tissue
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
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