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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
390
ChIP-seq
Assay category
390
DNA binding
Target of assay
244
transcription factor
74
histone
74
histone modification
69
control
66
recombinant protein
43
broad histone mark
37
RNA binding protein
31
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
390
November, 2017
353
August, 2017
94
December, 2017
90
May, 2021
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
53
February, 2021
50
July, 2018
50
May, 2020
49
October, 2019
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
August, 2021
24
May, 2022
23
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
390
Homo sapiens
Biosample type
315
cell line
66
tissue
9
primary cell
Organ
315
liver
75
brain
6
epithelium
6
vasculature
3
blood vessel
Project
390
AMP
Genome assembly (visualization)
281
hg19
268
GRCh38
Lab
390
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2020
BIOSAMPLE
ASSAY
390 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
layer of hippocampus
14
middle frontal area 46
8
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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