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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
27
snATAC-seq
17
single cell RNA-seq
6
WGBS
3
snDrop-seq
Assay category
510
Transcription
27
DNA accessibility
6
DNA methylation
Date released
546
February, 2021
324
November, 2017
287
August, 2017
189
May, 2020
173
May, 2021
164
July, 2018
121
August, 2021
94
December, 2017
92
February, 2023
88
November, 2018
73
September, 2018
63
July, 2019
60
October, 2018
49
April, 2018
44
March, 2020
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
23
February, 2020
20
November, 2019
17
October, 2017
16
October, 2019
11
September, 2017
9
December, 2019
7
August, 2020
5
January, 2018
4
August, 2018
4
November, 2020
3
June, 2018
1
March, 2019
Available data
507
tsv
506
bam
495
bigWig
89
txt
45
fastq
11
bed narrowPeak
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
2
tagAlign
Organism
546
Homo sapiens
Biosample type
452
tissue
46
primary cell
26
cell line
22
in vitro differentiated cells
Organ
449
connective tissue
386
adipose tissue
58
bone element
artery
52
blood vessel
52
heart
52
vasculature
32
epithelium
32
pancreas
8
kidney
Project
501
AMP
45
HPAP
Genome assembly (visualization)
493
GRCh38
493
hg19
Lab
501
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
32
audit script error
organ_slims!
artery
large intestine
BIOSAMPLE
ASSAY
546 results
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Clear Filters
total RNA-seq
snATAC-seq
single cell RNA-seq
WGBS
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 3 more…
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
cell line
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
See all biosamples
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