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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
total RNA-seq
1
GRO-seq
Assay category
10
DNA binding
4
Transcription
Target of assay
12
histone
histone modification
8
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
7
December, 2017
7
February, 2018
1
January, 2018
Available data
24
bam
18
bigWig
15
fastq
14
tsv
3
bed narrowPeak
1
bed bed3+
Organism
15
Homo sapiens
Biosample type
15
in vitro differentiated cells
Organ
420
liver
337
pancreas
177
epithelium
74
connective tissue
59
blood
59
bodily fluid
adipose tissue
18
spleen
15
embryo
11
brain
4
vasculature
2
blood vessel
2
musculature of body
Project
15
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
1
hg18
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
April, 2018
organ_slims!
adipose tissue
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
8
4
1
Hepatic endoderm
2
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