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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
Assay category
49
DNA binding
Target of assay
103
histone modification
102
histone
52
narrow histone mark
49
broad histone mark
47
transcription factor
31
control
8
RNA binding protein
3
chromatin remodeller
Date released
49
August, 2017
17
September, 2018
15
December, 2017
11
October, 2018
8
February, 2018
8
November, 2017
6
October, 2017
4
January, 2019
Available data
61
bigWig
56
bed narrowPeak
49
bam
49
fastq
45
tagAlign
22
bed broadPeak
18
bigBed narrowPeak
6
bed bed3+
6
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
21
tissue
16
primary cell
12
in vitro differentiated cells
Organ
24
pancreas
12
connective tissue
7
liver
6
epithelium
Project
49
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
49
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent assembly
month_released!
April, 2020
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
tissue
pancreas
8
liver
7
islet of Langerhans
6
primary cell
skeletal muscle myoblast
6
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
in vitro differentiated cells
adipocyte
12
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