Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
8
ATAC-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
9
DNA binding
8
DNA accessibility
3
Transcription
Target of assay
7
histone
7
histone modification
6
broad histone mark
2
control
1
narrow histone mark
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
21
fastq
18
bam
17
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
3
tsv
1
bedpe bed3+
Organism
21
Homo sapiens
Biosample type
17
tissue
3
primary cell
1
in vitro differentiated cells
Organ
10
brain
8
pancreas
3
epithelium
2
adipose tissue
2
connective tissue
1
spleen
Project
21
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
20
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
month_released!
November, 2020
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
pCHi-C
tissue
brain
9
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
See all biosamples
Download