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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
14
ChIP-seq
12
ATAC-seq
Assay category
15
Transcription
14
DNA binding
12
DNA accessibility
Target of assay
16
histone
histone modification
14
control
8
broad histone mark
8
narrow histone mark
Date released
306
November, 2017
184
August, 2017
88
November, 2018
76
February, 2023
63
December, 2017
50
July, 2018
45
February, 2021
44
April, 2018
44
October, 2018
41
September, 2018
41
September, 2020
35
December, 2018
24
May, 2022
23
February, 2018
23
January, 2019
11
September, 2017
10
October, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
41
fastq
34
bam
27
bigWig
15
tsv
5
bed narrowPeak
5
bigBed narrowPeak
2
bed bed3+
Organism
41
Homo sapiens
Biosample type
23
in vitro differentiated cells
12
primary cell
6
tissue
Organ
18
pancreas
12
epithelium
7
embryo
Project
34
AMP
7
HPAP
Genome assembly (visualization)
29
GRCh38
22
hg19
Lab
34
AMP-T2D consortium
7
Klaus Kaestner, Upenn
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
41 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
4
3
definitive endodermal cell
2
1
embryonic stem cell
2
1
endocrine cell
2
1
posterior foregut
2
1
+ See 2 more…
primary cell
pancreatic alpha cell
7
pancreatic beta cell
4
pancreatic acinar cell
1
tissue
islet of Langerhans
6
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