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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
7
ATAC-seq
7
total RNA-seq
Assay category
83
DNA binding
7
DNA accessibility
7
Transcription
Target of assay
31
control
29
transcription factor
23
histone
23
histone modification
17
RNA binding protein
15
broad histone mark
8
narrow histone mark
6
chromatin remodeller
Date released
324
November, 2017
287
August, 2017
94
December, 2017
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
106
bam
97
fastq
80
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
7
tsv
Organism
97
Homo sapiens
Biosample type
65
tissue
23
cell line
9
primary cell
Organ
44
pancreas
23
adipose tissue
23
connective tissue
18
blood
18
bodily fluid
9
epithelium
7
spleen
5
liver
Project
90
AMP
7
HPAP
Genome assembly (visualization)
66
GRCh38
59
hg19
Lab
90
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control read length
month_released!
November, 2018
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
body of pancreas
33
subcutaneous adipose tissue
12
omental fat pad
11
spleen
7
pancreas
2
cell line
GM12878
18
HepG2
5
primary cell
pancreatic alpha cell
5
pancreatic acinar cell
2
pancreatic beta cell
2
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