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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
Assay category
40
DNA binding
Target of assay
450
transcription factor
179
histone modification
178
histone
151
control
95
broad histone mark
85
RNA binding protein
82
narrow histone mark
82
recombinant protein
35
chromatin remodeller
5
other context
5
other post-translational modification
Date released
17
November, 2017
10
November, 2018
6
January, 2019
3
August, 2017
2
December, 2017
2
December, 2018
Available data
40
bam
40
bed narrowPeak
40
bigWig
40
fastq
38
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
Organism
40
Homo sapiens
Biosample type
32
cell line
5
tissue
2
in vitro differentiated cells
1
primary cell
Organ
25
liver
10
blood
10
bodily fluid
3
spleen
2
connective tissue
epithelium
Project
40
AMP
Genome assembly (visualization)
40
hg19
38
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
13
inconsistent control read length
8
inconsistent control run_type
organ_slims!
epithelium
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
cell line
HepG2
22
GM12878
10
tissue
spleen
3
liver
2
in vitro differentiated cells
adipocyte
2
primary cell
skeletal muscle myoblast
1
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